CellMapper - Predict genes expressed selectively in specific cell types
Infers cell type-specific expression based on co-expression similarity with known cell type marker genes. Can make accurate predictions using publicly available expression data, even when a cell type has not been isolated before.
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microarraysoftwaregeneexpression
4.43 score 1 dependents 15 scripts 496 downloadsHumanAffyData - GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects
Re-analysis of human gene expression data generated on the Affymetrix HG_U133PlusV2 (EH176) and Affymetrix HG_U133A (EH177) platforms. The original data were normalized using robust multiarray averaging (RMA) to obtain an integrated gene expression atlas across diverse biological sample types and conditions. The entire compendia comprisee 9395 arrays for EH176 and 5372 arrays for EH177.
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experimentdatageoarrayexpresshomo_sapiens_datamicroarraydataexpressiondatadatapkg
3.30 scoreCellMapperData - Pre-processed data for use with the CellMapper package
Experiment data package. Contains microarray data from several large expression compendia that have been pre-processed for use with the CellMapper package. This pre-processed data is recommended for routine searches using the CellMapper package.
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experimentdatamicroarraydataexpressiondatadatapkg
3.30 score